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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015870214.1_cds_XP_016434000.1_30101
CDS Infomation

[gene=LOC107760466] [db_xref=GeneID:107760466] [protein=protochlorophyllide-dependent translocon component 52, chloroplastic-like] [protein_id=XP_016434000.1] [location=complement(join(9871..10126,10320..10507,11689..11886,11987..12173,12269..12358,12616..12803,15344..15886))] [gbkey=CDS]
Sequence

ATGCAAGCTTTCAAAGCTTCTTCATTTACACCATTTCAAGTACTCAACTTGAACTACTCA
ACTAGATCATTTCCCAAAACCATATATGACAAACCAAACTTGAATATTCATCCAAATAAT
GAAAACCCCATTTCATGTTTTCCCTCAATTCAGAGCCAAAATACAAAATTCAAGCTTTTC
ACTGCTGTTTCTCAAAGTATCTCAACTGAATCAAGAACCCCATTTGATGAAGAAACTGAA
AATGAAAACCAAGAAGAGAAATTTGATTGGTATGCTGAGTGGTATCCAATAATGCCAATT
TGTGATCTTGATAAGAGGAGGCCACATGGGAAAAAAGTGATGGGAATAGATGTGGTGGTT
TGGTGGGATAGAAATGAGAAAGAATGGAAAGTGATGGATGATGCTTGTCCACATAGATAT
GCTCCACTTTCTGAAGGAAGGATTGATCAGTGGGGGAGATTGCAGTGTGTGTATCATGGT
TGGTGTTTTGGTGGTTCTGGTGATTGCAAGTTCATTCCTCAAGCTCCTAGGGATGGCCCT
CCGGTTCACACGTCCAAAAGAGCTTGTGCAACTGTTTATCCAAGTTGTGTGCAAAATGAT
ATTCTTTGGTTTTGGCCAAATTCTGATCCTCTATACAAGGGCATATATCTGAAGAAAAGG
CCTCCTTACATCCCTGAACTGGACGACAGCTCGTTTTCGAAATCTTTCATGGTCAGAGAT
ATATCATATGGGTATGAGCTTCTGATTGAAAACCTTATGGACCCAGCTCATGTCCAATAT
TCACATTATGGCATAATGAATGTTCCACAACCTCCCAAAAGTGTGAAGGCTGATAGGGAA
GGAGGAAGACCACTCGATATAACTGTCACGAAACTGGATGTAAATAGTATTACTGCAAAC
CAAGGACCTGGACGGAACACATTCATTGCACCTTGTGTGTATTATAGTCTTTTTGCTTTC
GGAGGAAATCAGGGTAAAACGTCTGCTGTATCATCTGGAGCTGTACAGGAAAAACCTTCA
ACTGAGAAGCAGAAAAAAGCATTATTAGTTTTCATCTGTATTCCAGTTAGTCCAGGTCAT
AGCAGAATTATTTTTGCATCTCCAAGAAACTTTGCTACTTGGGCAGATCGAATAATTCCA
CGTTGGATATTTCACCTGGGGCAAAACCTAATTTTGGATTCAGATTTATATCTTCTTCAT
GTGGAGGAGCACAAGCTAAAGGAAATTGGTCCCTATAATTGGCATAAAGCTTGTTATATG
CCAACCAAGGCAGATGCCATTGTTGTTGCTTTCAGAAGGTGGCTAAACAAATATGCAGGT
GGCCAAGTTGATTGGCGCGCAAAGTACAACGGAGACCTCCCACCAACTCCTCCAAGGGAG
CAGCTGCTGGACAGGTACTGGACTCATACGGTGAATTGCACAAGTTGCAATTTCGCATAT
AAAGGTCTCAATGCCCTTGAAATTATACTGCAGATCGCCTCAATTGGTATGATCGGAGTT
GTTGCTGCAGCCAAGCAGGGTACGTTGTCTATGGTCACGAGGTATTCTTTGGTCTCCGTT
GCATTACTATGCTTCGTGGCCTCGAGGTGGTTATCTCACTTTATATACAAAAATTTCCAT
TTCCACGACTACGACCATGCCTTCCGTTGA

Peptide Sequence

PEP ID

XP_016434000.1
PEP Infomation

PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Nicotiana tabacum]
Sequence

MQAFKASSFTPFQVLNLNYSTRSFPKTIYDKPNLNIHPNNENPISCFPSIQSQNTKFKLF
TAVSQSISTESRTPFDEETENENQEEKFDWYAEWYPIMPICDLDKRRPHGKKVMGIDVVV
WWDRNEKEWKVMDDACPHRYAPLSEGRIDQWGRLQCVYHGWCFGGSGDCKFIPQAPRDGP
PVHTSKRACATVYPSCVQNDILWFWPNSDPLYKGIYLKKRPPYIPELDDSSFSKSFMVRD
ISYGYELLIENLMDPAHVQYSHYGIMNVPQPPKSVKADREGGRPLDITVTKLDVNSITAN
QGPGRNTFIAPCVYYSLFAFGGNQGKTSAVSSGAVQEKPSTEKQKKALLVFICIPVSPGH
SRIIFASPRNFATWADRIIPRWIFHLGQNLILDSDLYLLHVEEHKLKEIGPYNWHKACYM
PTKADAIVVAFRRWLNKYAGGQVDWRAKYNGDLPPTPPREQLLDRYWTHTVNCTSCNFAY
KGLNALEIILQIASIGMIGVVAAAKQGTLSMVTRYSLVSVALLCFVASRWLSHFIYKNFH
FHDYDHAFR

Transcript Sequence

Gene sequence data has not been registered.